The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama34540 | PROTEIN CBG03580 |
Ama34541 | CONNECTOR ENCHANCER OF KINASE SUPPRESSOR OF RAS |
Ama34542 | METABOTROPIC GLUTAMATE RECEPTOR |
Ama34543 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama34544 | |
Ama34548 | |
Ama34549 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama34551 | BONUS, ISOFORM C-RELATED |
Ama34552 | PROTEIN GAMETE EXPRESSED 1 |
Ama34553 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama34554 | UNCHARACTERIZED |
Ama34555 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama34557 | MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED |
Ama34558 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama34559 | |
Ama34561 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama34562 | |
Ama34563 | |
Ama34565 | |
Ama34566 | CONDENSIN |
Ama34567 | ACID PHOSPHATASE-RELATED |
Ama34568 | |
Ama34569 | |
Ama34570 | CHITINASE |
Ama34572 | CHITINASE |
Ama34574 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
Ama34575 | ALKALINE PHOSPHATASE |
Ama34576 | LEUCINE ZIPPER PROTEIN 4-RELATED |
Ama34577 | ALKALINE PHOSPHATASE |
Ama34578 | ALKALINE PHOSPHATASE |
Ama34579 | |
Ama34580 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama34581 | |
Ama34583 | |
Ama34584 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama34585 | TRANSPOSON |
Ama34586 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama34587 | |
Ama34588 | |
Ama34590 | |
Ama34591 | |
Ama34592 | |
Ama34593 | |
Ama34594 | THAP DOMAIN PROTEIN |
Ama34595 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama34596 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama34597 | |
Ama34598 | |
Ama345_5db7b01a | |
Ama34601 | UNCHARACTERIZED NODULIN-LIKE PROTEIN |