The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama34415 | |
Ama34416 | ADP RIBOSYLATION FACTOR-RELATED |
Ama34418 | TEL2 INTERACTING PROTEIN 1 TTI1 FAMILY MEMBER |
Ama34420 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34421 | HYALURONIDASE |
Ama34422 | |
Ama34426 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
Ama34427 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
Ama34428 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
Ama34429 | |
Ama34430 | |
Ama34431 | TUBULIN |
Ama34432 | TUBULIN |
Ama34433 | DEOXYNUCLEOSIDE KINASE |
Ama34434 | OS05G0310600 PROTEIN |
Ama34435 | |
Ama34436 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama34437 | |
Ama34438 | |
Ama34439 | |
Ama34440 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama34441 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
Ama34444 | RIBOSOMAL RNA METHYLTRANSFERASE |
Ama34445 | |
Ama34454 | GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN |
Ama34455 | FERROCHELATASE |
Ama34456 | DYNAMIN |
Ama34458 | UNCHARACTERIZED |
Ama34459 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY G MEMBER 7 |
Ama34462 | |
Ama34463 | OS05G0310600 PROTEIN |
Ama34464 | |
Ama34465 | TRANSPOSON |
Ama34466 | |
Ama34467 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama34468 | TRANSPOSON |
Ama34469 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama34470 | THAP DOMAIN PROTEIN |
Ama34471 | |
Ama34472 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama34473 | ATP-DEPENDENT DNA HELICASE |
Ama34474 | TRANSPOSABLE ELEMENT-RELATED |
Ama34475 | INHIBITOR OF APOPTOSIS |
Ama34476 | |
Ama34477 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34478 | |
Ama34479 | INNER MEMBRANE TRANSPORT PROTEIN YAJR |
Ama34480 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama34481 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama34482 |