The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama34686 | BONUS, ISOFORM C-RELATED |
Ama34687 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama34698 | BONUS, ISOFORM C-RELATED |
Ama34699 | |
Ama346_5db7b01a | CARBOHYDRATE SULFOTRANSFERASE |
Ama34700 | |
Ama34701 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama34705 | RIKEN CDNA D130052B06 GENE |
Ama34706 | |
Ama34708 | ZINC FINGER PROTEIN |
Ama34709 | CYTOCHROME P450 FAMILY 4 |
Ama34710 | PUTATIVE-RELATED |
Ama34713 | SPORE COAT PROTEIN SP85 |
Ama34714 | |
Ama34715 | |
Ama34716 | BONUS, ISOFORM C-RELATED |
Ama34718 | |
Ama34772 | BONUS, ISOFORM C-RELATED |
Ama34773 | |
Ama34774 | |
Ama34775 | |
Ama34776 | SI:CH211-108C17.2-RELATED-RELATED |
Ama34777 | ZGC:195170 |
Ama34778 | BONUS, ISOFORM C-RELATED |
Ama34781 | BONUS, ISOFORM C-RELATED |
Ama34782 | |
Ama34783 | |
Ama34784 | |
Ama34785 | INHIBITOR OF APOPTOSIS |
Ama34789 | |
Ama34790 | |
Ama34791 | |
Ama34792 | |
Ama34794 | |
Ama34795 | |
Ama347_5db7b01a | LONGEVITY ASSURANCE FACTOR 1 LAG1 |
Ama34800 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama34802 | |
Ama34807 | |
Ama34809 | SOLUTE CARRIER FAMILY 35 |
Ama34811 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER |
Ama34813 | |
Ama34814 | |
Ama34816 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
Ama34817 | |
Ama34818 | |
Ama34819 | PROTEIN DISPATCHED HOMOLOG 3 |
Ama34821 | - |
Ama34822 | PUTATIVE-RELATED |
Ama34823 |