The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama36853 | ZINC FINGER PROTEIN |
Ama36854 | G-PROTEIN COUPLED RECEPTOR |
Ama36855 | |
Ama36856 | |
Ama36857 | |
Ama36858 | NETRIN RECEPTOR UNC5 |
Ama36859 | U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN |
Ama36860 | G-PROTEIN COUPLED RECEPTOR |
Ama36861 | ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED |
Ama36862 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 |
Ama36863 | UNCHARACTERIZED |
Ama36865 | |
Ama36866 | TYROSINASE FAMILY MEMBER |
Ama36867 | TYROSINASE FAMILY MEMBER |
Ama36868 | DOUBLECORTIN DOMAIN CONTAINING 2 |
Ama36869 | TMEM26 PROTEIN |
Ama36871 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
Ama36872 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama36873 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
Ama36874 | CS DOMAIN-CONTAINING PROTEIN |
Ama36876 | ACETYLGLUCOSAMINYLTRANSFERASE |
Ama36878 | EIF4G DOMAIN PROTEIN |
Ama36879 | |
Ama36880 | |
Ama36883 | MARINER MOS1 TRANSPOSASE-LIKE PROTEIN |
Ama36884 | LITHOSTATHINE |
Ama36885 | MARINER MOS1 TRANSPOSASE-LIKE PROTEIN |
Ama36886 | |
Ama36888 | |
Ama36890 | |
Ama36891 | T-BOX PROTEIN-RELATED |
Ama36892 | REQUIRED FOR EXCISION 1-B DOMAIN-CONTAINING PROTEIN |
Ama36893 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS W PROTEIN |
Ama36894 | |
Ama36896 | APPLE DOMAIN-CONTAINING PROTEIN |
Ama36897 | RCC1-LIKE G EXCHANGING FACTOR-LIKE PROTEIN |
Ama36899 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
Ama368_5db7b01a | TUBULIN MONOGLYCYLASE TTLL3 |
Ama36901 | |
Ama36903 | SAL-LIKE PROTEIN |
Ama36905 | |
Ama36906 | PR DOMAIN ZINC FINGER PROTEIN |
Ama36908 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Ama36909 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Ama36910 | |
Ama36912 | |
Ama36913 | |
Ama36914 | |
Ama36916 | |
Ama36917 |