The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama37289 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama37290 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama37291 | GLYCOPROTEIN HORMONE RECEPTOR |
Ama37293 | CT120 PROTEIN |
Ama37294 | - |
Ama37295 | - |
Ama37296 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama37297 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama37298 | SPHINGOMYELIN PHOSPHODIESTERASE |
Ama37300 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37301 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37303 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37304 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37305 | |
Ama37306 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37307 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37308 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37310 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37311 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37312 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37313 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37314 | RETROTRANSPOSON |
Ama37316 | |
Ama37317 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37318 | |
Ama37319 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37320 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37321 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37322 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37324 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37326 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama37327 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama37329 | RETROTRANSPOSON |
Ama37330 | RETROTRANSPOSON |
Ama37331 | RETROTRANSPOSON |
Ama37332 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama37333 | RETROTRANSPOSON |
Ama37334 | RETROTRANSPOSON |
Ama37335 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama37336 | RETROTRANSPOSON |
Ama37337 | |
Ama37338 | RETROTRANSPOSON |
Ama37340 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama37341 | RETROTRANSPOSON |
Ama37342 | RETROTRANSPOSON |
Ama37344 | |
Ama37345 | RETROTRANSPOSON |
Ama37347 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama37348 | RETROTRANSPOSON |
Ama37349 | RETROTRANSPOSON |