About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama37983NEUROTRANSMITTER GATED ION CHANNEL
Ama37985PLACENTAL PROTEIN 6
Ama37987
Ama37988OTU DOMAIN CONTAINING PROTEIN
Ama37989PLACENTAL PROTEIN 6
Ama37990PLACENTAL PROTEIN 6
Ama37991L1 TRANSPOSABLE ELEMENT-RELATED
Ama37992PLACENTAL PROTEIN 6
Ama37993PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Ama37994ENDONUCLEASE-RELATED
Ama37995ABC TRANSPORTER B FAMILY
Ama37996ATP-BINDING CASSETTE SUB-FAMILY B
Ama37997ATP-BINDING CASSETTE SUB-FAMILY B
Ama37998SET DOMAIN-CONTAINING PROTEIN-RELATED
Ama379_5db7b01a
Ama37_5db7b01aCONNECTIVE TISSUE GROWTH FACTOR-RELATED
Ama38000UNCHARACTERIZED
Ama38001
Ama38002UNCHARACTERIZED
Ama38003
Ama38010COLORECTAL MUTANT CANCER PROTEIN MCC PROTEIN -RELATED
Ama38013FIBRINOGEN ALPHA CHAIN
Ama38015NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN-RELATED
Ama38016MESODERM DEVELOPMENT CANDIDATE 2
Ama38017
Ama38018RAS-RELATED PROTEIN RAB
Ama38019IP01015P-RELATED
Ama38021VOLTAGE-GATED POTASSIUM CHANNEL
Ama38022CUBILIN-LIKE PROTEIN
Ama38023
Ama38026-
Ama38027-
Ama38028
Ama38030REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama38031REVERSE TRANSCRIPTASES
Ama38032ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Ama38033-
Ama38034
Ama38035PYRUVATE KINASE
Ama38036INHIBITOR OF APOPTOSIS
Ama38037RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama38038TRICHOHYALIN-RELATED
Ama38039
Ama38042
Ama38043CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Ama38046
Ama38047SMAD
Ama38050UNCHARACTERIZED
Ama38051SIN3B-RELATED
Ama38052
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