The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama38112 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama38113 | DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE |
Ama38114 | UNCHARACTERIZED |
Ama38115 | PROTEIN HINDERIN |
Ama38116 | |
Ama38117 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
Ama38119 | |
Ama38121 | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE |
Ama38123 | PR DOMAIN ZINC FINGER PROTEIN |
Ama38124 | CARNITINE O-ACYLTRANSFERASE |
Ama38125 | CARNITINE O-ACYLTRANSFERASE |
Ama38126 | HISTIDINE TRIAD HIT PROTEIN |
Ama38127 | - |
Ama38128 | 40S RIBOSOMAL PROTEIN S27 |
Ama38129 | PHOSPHOENOLPYRUVATE CARBOXYKINASE |
Ama38130 | METALLOPROTEASE TLDD |
Ama38131 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
Ama38132 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama38133 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama38134 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama38135 | - |
Ama38136 | THIOREDOXIN-LIKE PROTEIN 1 |
Ama38139 | |
Ama38140 | |
Ama38141 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38144 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama38146 | |
Ama38147 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
Ama38156 | TALIN |
Ama38157 | |
Ama38159 | MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN |
Ama38160 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama38163 | |
Ama38164 | |
Ama38165 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama38166 | |
Ama38167 | |
Ama38168 | 5'-NUCLEOTIDASE-RELATED |
Ama38169 | SCAVENGER RECEPTOR CLASS F |
Ama38170 | |
Ama38171 | E3 UBIQUITIN-PROTEIN LIGASE RNF165 |
Ama38172 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama38174 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama38175 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Ama38176 | 80 KDA MCM3-ASSOCIATED PROTEIN |
Ama38177 | |
Ama38179 | GUANYLYL CYCLASE |
Ama38180 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
Ama38181 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
Ama38182 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |