The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama38441 | PEPTIDASE |
Ama38442 | PEPTIDASE |
Ama38444 | PEPTIDASE |
Ama38446 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38447 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38448 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama38449 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama38450 | |
Ama38451 | SCHWANNOMIN INTERACTING PROTEIN 1 |
Ama38452 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama38453 | |
Ama38454 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama38455 | |
Ama38457 | |
Ama38458 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama38459 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38461 | |
Ama38462 | |
Ama38463 | |
Ama38467 | |
Ama38468 | |
Ama38469 | |
Ama38470 | TRANSPOSABLE ELEMENT-RELATED |
Ama38471 | LEUCOKININ RECEPTOR-RELATED |
Ama38474 | |
Ama38475 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama38478 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama38479 | |
Ama38480 | |
Ama38482 | TRANSPOSABLE ELEMENT-RELATED |
Ama38483 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama38486 | |
Ama38488 | PUTATIVE-RELATED |
Ama38490 | |
Ama38491 | |
Ama38492 | DNAJ-LIKE-2, ISOFORM A-RELATED |
Ama38493 | |
Ama38494 | |
Ama38495 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38496 | THAP DOMAIN PROTEIN |
Ama38497 | ATP-DEPENDENT DNA HELICASE |
Ama38498 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama38499 | |
Ama384_5db7b01a | METHYLTRANSF_11 DOMAIN-CONTAINING PROTEIN |
Ama38500 | TSEC1-RELATED |
Ama38502 | TSEC1-RELATED |
Ama38504 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama38505 | |
Ama38506 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama38508 | CYSTEINE DIOXYGENASE |