The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama392_5db7b01a | MOLTING PROTEIN MLT-4 |
Ama39300 | GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN |
Ama39301 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama39302 | BONUS, ISOFORM C-RELATED |
Ama39303 | |
Ama39304 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama39305 | |
Ama39306 | CHARGED MULTIVESICULAR BODY PROTEIN |
Ama39306.1.5db7de6c | CHARGED MULTIVESICULAR BODY PROTEIN |
Ama39308 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
Ama39309 | HILLARIN |
Ama39316 | |
Ama39317 | PEPTIDYLPROLYL ISOMERASE |
Ama39318 | |
Ama39319 | |
Ama39320 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama39322 | |
Ama39323 | G-PROTEIN COUPLED RECEPTOR |
Ama39328 | |
Ama39329 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama39330 | ACYL-COA DEHYDROGENASE |
Ama39331 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama39332 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama39334 | SI:CH211-108C17.2-RELATED-RELATED |
Ama39335 | REVERSE TRANSCRIPTASES |
Ama39336 | PENICILLIN-BINDING PROTEIN |
Ama39337 | N-LYSINE METHYLTRANSFERASE KMT5A |
Ama39343 | PROTEIN UNC-13 HOMOLOG |
Ama39344 | PROTEIN UNC-13 HOMOLOG |
Ama39349 | PROTEIN DISPATCHED-RELATED |
Ama39350 | PROTEIN DISPATCHED-RELATED |
Ama39351 | |
Ama39352 | |
Ama39353 | TUBULIN |
Ama39354 | |
Ama39356 | |
Ama39357 | |
Ama39358 | |
Ama39359 | |
Ama39367 | UNCHARACTERIZED |
Ama39370 | INHIBITOR OF APOPTOSIS |
Ama39371 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama39373 | SODIUM/NUCLEOSIDE COTRANSPORTER |
Ama39375 | |
Ama39378 | |
Ama39379 | |
Ama39385 | CONTACTIN 5 |
Ama39391 | |
Ama39393 | |
Ama39394 |