The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama39628 | |
Ama39630 | AMP-BINDING DOMAIN-CONTAINING PROTEIN |
Ama39632 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama39633 | TRANSPOSON |
Ama39634 | PARANEOPLASTIC ANTIGEN |
Ama39635 | |
Ama39637 | DEFORMED EPIDERMAL AUTOREGULATORY FACTOR 1 HOMOLOG SUPPRESSIN |
Ama39638 | DEFORMED EPIDERMAL AUTOREGULATORY FACTOR 1 HOMOLOG SUPPRESSIN |
Ama39639 | |
Ama39640 | |
Ama39641 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama39642 | INHIBITOR OF APOPTOSIS |
Ama39643 | |
Ama39645 | G-PROTEIN COUPLED RECEPTOR |
Ama39646 | G-PROTEIN COUPLED RECEPTOR |
Ama39648 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
Ama39649 | RHO FAMILY GTPASE |
Ama39650 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama39651 | |
Ama39652 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
Ama39653 | |
Ama39655 | |
Ama39656 | TETRATRICOPEPTIDE REPEAT PROTEIN, TPR |
Ama39657 | |
Ama39658 | |
Ama39659 | HILLARIN |
Ama39660 | RAB FAMILY |
Ama39664 | SECERNIN |
Ama39668 | PUTATIVE-RELATED |
Ama39669 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama39671 | |
Ama39672 | PROTEIN TORNADO 1 |
Ama39673 | |
Ama39674 | |
Ama39675 | |
Ama39676 | |
Ama39678 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama39679 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama39680 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama39681 | |
Ama39683 | THAP DOMAIN PROTEIN |
Ama39684 | |
Ama39686 | PEPTIDASE |
Ama39687 | |
Ama39688 | INHIBITOR OF APOPTOSIS |
Ama39689 | |
Ama39691 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama39692 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama39693 | |
Ama39695 |