The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama16280 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama16281 | |
Ama16282 | UNCHARACTERIZED |
Ama16283 | NULP1-RELATED |
Ama16284 | NULP1-RELATED |
Ama16285 | DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1 |
Ama16286 | UNCHARACTERIZED |
Ama16287 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama16288 | |
Ama16289 | UNCHARACTERIZED |
Ama16290 | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED |
Ama16291 | EUKARYOTIC ELONGATION FACTOR 2 KINASE-RELATED |
Ama16293 | DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1 |
Ama16295 | |
Ama16296 | DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1 |
Ama16297 | MSF1/PX19 RELATED |
Ama16299 | KINESIN-LIKE PROTEIN KIN-12D |
Ama162_5db7b01a | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama16300 | RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED |
Ama16301 | |
Ama16302 | |
Ama16303 | - |
Ama16304 | YALI0E18722P |
Ama16305 | |
Ama16306 | |
Ama16307 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
Ama16309 | T-CELL IMMUNOMODULATORY PROTEIN HOMOLOG |
Ama16310 | |
Ama16311 | AMINO ACID TRANSPORTER |
Ama16312 | UNC-93 RELATED |
Ama16313 | |
Ama16314 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama16315 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
Ama16317 | |
Ama16318 | |
Ama16319 | |
Ama16320 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama16322 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
Ama16324 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama16325 | |
Ama16326 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama16327 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
Ama16328 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama16329 | |
Ama16330 | CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4 |
Ama16331 | |
Ama16332 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama16333 | LEUCOKININ RECEPTOR-RELATED |
Ama16334 | ATP-DEPENDENT DNA HELICASE |
Ama16335 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |