The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama16464 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama16465 | |
Ama16466 | DIABETES AND OBESITY REGULATED, ISOFORM G |
Ama16469 | |
Ama16470 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
Ama16471 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama16472 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama16473 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
Ama16474 | MIR DOMAIN-CONTAINING PROTEIN |
Ama16475 | ASPARTATE AMINOTRANSFERASE |
Ama16476 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama16477 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN |
Ama16478 | |
Ama16479 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama16480 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama16481 | SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 |
Ama16482 | MATING RESPONSE PROTEIN POI2 |
Ama16483 | PROTEIN SIDEKICK |
Ama16484 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
Ama16485 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama16486 | OTU DOMAIN CONTAINING PROTEIN |
Ama16487 | ARGINYL-TRNA SYNTHETASE |
Ama16488 | |
Ama16489 | |
Ama16490 | PR DOMAIN ZINC FINGER PROTEIN |
Ama16491 | |
Ama16494 | |
Ama16495 | - |
Ama16496 | |
Ama16497 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama16498 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama16499 | CLEFT LIP AND PALATE ASSOCIATED TRANSMEMBRANE PROTEIN-RELATED |
Ama164_5db7b01a | MONOCARBOXYLATE TRANSPORTER |
Ama16500 | SPERMATOGENESIS-ASSOCIATED PROTEIN 48 |
Ama16501 | EF-HAND DOMAIN-CONTAINING PROTEIN |
Ama16502 | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED |
Ama16503 | INTERFERON REGULATORY FACTOR |
Ama16504 | DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED |
Ama16505 | N6-ADENOSINE-METHYLTRANSFERASE |
Ama16507 | UBIQUITIN-CONJUGATING ENZYME E2 |
Ama16508 | CCCH ZINGC FINGER |
Ama16509 | TRANSCRIPTION FACTOR MAF |
Ama16510 | RETINOL DEHYDROGENASE |
Ama16511 | SH3 MULTIPLE DOMAIN |
Ama16512 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
Ama16513 | IP01015P-RELATED |
Ama16515 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama16516 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama16517 | TYROSINASE FAMILY MEMBER |
Ama16518 | TYROSINASE FAMILY MEMBER |