The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama16157 | NEURALIZED |
Ama16158 | |
Ama16159 | ACYLOXYACYL HYDROLASE |
Ama16161 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
Ama16162 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama16165 | |
Ama16166 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
Ama16167 | |
Ama16168 | GUANYLYL CYCLASE |
Ama16169 | FATTY ACID BINDING PROTEIN |
Ama16170 | SI:CH211-266K22.6 |
Ama16171 | ANKYRIN REPEAT-CONTAINING |
Ama16172 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama16174 | RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C |
Ama16175 | |
Ama16177 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama16179 | |
Ama16180 | PIKACHURIN-LIKE PROTEIN |
Ama16181 | 60S RIBOSOMAL PROTEIN L14 |
Ama16182 | D-LACTATE DEHYDROGENASE |
Ama16185 | |
Ama16186 | |
Ama16190 | |
Ama16191 | |
Ama16192 | 3-KETODIHYDROSPHINGOSINE REDUCTASE |
Ama16193 | F-BOX ONLY PROTEIN 33 |
Ama16195 | |
Ama16197 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
Ama16198 | |
Ama16199 | UNCHARACTERIZED |
Ama161_5db7b01a | ANKYRIN REPEAT FAMILY PROTEIN |
Ama16200 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
Ama16202 | RIBOSOMAL RNA METHYLTRANSFERASE |
Ama16203 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
Ama16204 | DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT DAD1 |
Ama16205 | |
Ama16207 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama16208 | |
Ama16209 | UNCHARACTERIZED |
Ama16210 | UNCHARACTERIZED |
Ama16211 | |
Ama16212 | ALKALINE PHOSPHATASE |
Ama16213 | DNA REPLICATION COMPLEX GINS PROTEIN PSF2 |
Ama16214 | PROGESTERONE-INDUCED BLOCKING FACTOR 1 |
Ama16216 | PROGESTERONE-INDUCED BLOCKING FACTOR 1 |
Ama16218 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
Ama16219 | ZINC FINGER PROTEIN |
Ama16220 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
Ama16221 | |
Ama16222 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |