The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama15896 | |
Ama15897 | NEPHRIN |
Ama15898 | NEPHRIN |
Ama158_5db7b01a | CENTROMERE PROTEIN V |
Ama15902 | AGAP001331-PA-RELATED |
Ama15903 | |
Ama15905 | NEPHRIN |
Ama15907 | |
Ama15908 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
Ama15909 | VASCULAR CELL ADHESION MOLECULE 1 |
Ama15910 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
Ama15911 | |
Ama15913 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama15915 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama15916 | NEPHRIN |
Ama15917 | CONTACTIN 5 |
Ama15918 | |
Ama15919 | NEPHRIN |
Ama15920 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
Ama15921 | |
Ama15922 | |
Ama15923 | CONTACTIN 5 |
Ama15924 | |
Ama15925 | NEPHRIN |
Ama15927 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama15928 | INHIBITOR OF APOPTOSIS |
Ama15929 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama15931 | NEPHRIN |
Ama15932 | |
Ama15933 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
Ama15934 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama15935 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama15936 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama15937 | |
Ama15938 | PROTEIN CBG10425 |
Ama15939 | |
Ama15940 | MANNAN POLYMERASE II |
Ama15942 | CARBOHYDRATE SULFOTRANSFERASE |
Ama15943 | |
Ama15944 | PROTEIN CBG22215 |
Ama15945 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama15946 | THAP DOMAIN PROTEIN |
Ama15947 | |
Ama15948 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama15949 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama15950 | |
Ama15952 | |
Ama15953 | |
Ama15954 | NEPHRIN |
Ama15955 |