The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama15838 | |
Ama15839 | |
Ama15840 | CONTACTIN 5 |
Ama15841 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
Ama15843 | |
Ama15844 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama15845 | |
Ama15846 | |
Ama15847 | |
Ama15848 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama15849 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama15850 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
Ama15851 | CONTACTIN 5 |
Ama15852 | |
Ama15854 | SIDESTEP PROTEIN |
Ama15855 | PROTEIN CBG26694 |
Ama15856 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama15858 | |
Ama15859 | |
Ama15860 | NEPHRIN |
Ama15861 | THAP DOMAIN PROTEIN |
Ama15862 | |
Ama15863 | |
Ama15864 | |
Ama15865 | |
Ama15866 | |
Ama15867 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama15868 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama15869 | B-CELL RECEPTOR CD22 |
Ama15870 | |
Ama15872 | NEPHRIN |
Ama15873 | DNA POLYMERASE |
Ama15877 | ALDEHYDE DEHYDROGENASE-RELATED |
Ama15878 | ALDEHYDE DEHYDROGENASE-RELATED |
Ama15879 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Ama15880 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Ama15881 | |
Ama15882 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama15883 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama15884 | CONTACTIN 5 |
Ama15885 | |
Ama15886 | NEPHRIN |
Ama15887 | |
Ama15888 | |
Ama15889 | ENDONUCLEASE-RELATED |
Ama15891 | |
Ama15892 | |
Ama15893 | |
Ama15894 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
Ama15895 | ATP-DEPENDENT DNA HELICASE |