The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama15585 | CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR |
Ama15586 | |
Ama15587 | TITIN |
Ama15588 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
Ama15589 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
Ama15590 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama15591 | |
Ama15593 | |
Ama15594 | REVERSE TRANSCRIPTASES |
Ama15595 | TUBULIN-SPECIFIC CHAPERONE E |
Ama15596 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama15597 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Ama15598 | |
Ama15599 | VACUOLAR PROTEIN SORTING 26 RELATED |
Ama155_5db7b01a | RIBOSOMAL PROTEIN S6 KINASE |
Ama15600 | STABILIZER OF AXONEMAL MICROTUBULES 2 |
Ama15602 | SERINE/THREONINE-RICH PROTEIN ADG2-RELATED |
Ama15603 | WD40 REPEAT PROTEIN 12, 37 |
Ama15604 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama15605 | CENTROSOMAL PROTEIN OF 112 KDA |
Ama15606 | PHOSDUCIN-LIKE PROTEIN |
Ama15607 | GLUTATHIONE S-TRANSFERASE-RELATED |
Ama15608 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama15609 | |
Ama15610 | UNCHARACTERIZED |
Ama15611 | |
Ama15612 | UNCHARACTERIZED |
Ama15613 | HEME TRANSPORTER HRG1 |
Ama15614 | EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN |
Ama15615 | WD40 REPEAT PROTEIN 12, 37 |
Ama15616 | PX DOMAIN-CONTAINING PROTEIN |
Ama15617 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
Ama15621 | LASP |
Ama15625 | PROTEIN CBG16428 |
Ama15626 | |
Ama15627 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
Ama15628 | GLUTAMATE DECARBOXYLASE-RELATED |
Ama15629 | 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED |
Ama15630 | CORNICHON-RELATED |
Ama15631 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama15632 | |
Ama15633 | |
Ama15634 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama15635 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama15637 | |
Ama15638 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama15639 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama15640 | MUCIN 4-RELATED |
Ama15641 | |
Ama15642 |