The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama15296 | |
Ama15297 | METAXIN RELATED |
Ama15298 | |
Ama152_5db7b01a | LEUCINE RICH REPEAT PROTEIN |
Ama15300 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
Ama15301 | RIBONUCLEASE H1 |
Ama15302 | |
Ama15303 | PROTEASE M1 ZINC METALLOPROTEASE |
Ama15304 | PROTEASE M1 ZINC METALLOPROTEASE |
Ama15305 | PROTEASE M1 ZINC METALLOPROTEASE |
Ama15306 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama15307 | |
Ama15308 | ETS |
Ama15309 | ACYL-COA DEHYDROGENASE |
Ama15310 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama15311 | WD40 REPEAT PF20 |
Ama15312 | |
Ama15313 | DNA PRIMASE LARGE SUBUNIT |
Ama15314 | TROPONIN C-AKIN-1 PROTEIN |
Ama15315 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
Ama15316 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
Ama15318 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama15320 | SELENOPROTEIN S |
Ama15321 | CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN |
Ama15322 | REVERSE TRANSCRIPTASES |
Ama15323 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama15328 | TRANSCRIPTION INTERMEDIARY FACTOR |
Ama15331 | TRANSCRIPTION INTERMEDIARY FACTOR |
Ama15332 | HEAT SHOCK PROTEIN 70KDA |
Ama15333 | PUTATIVE-RELATED |
Ama15334 | G PROTEIN PATHWAY SUPPRESSOR 2 |
Ama15341 | E3 UBIQUITIN-PROTEIN LIGASE TTC3 |
Ama15347 | E3 UBIQUITIN-PROTEIN LIGASE TTC3 |
Ama15354 | OTU DOMAIN CONTAINING PROTEIN |
Ama15356 | DNA-DIRECTED RNA POLYMERASE II, III |
Ama15357 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Ama15358 | |
Ama15360 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama15361 | POU DOMAIN |
Ama15362 | |
Ama15363 | HRAS-LIKE SUPPRESSOR - RELATED |
Ama15364 | KREMEN PROTEIN |
Ama15365 | ATILLA, ISOFORM B-RELATED-RELATED |
Ama15366 | ENHANCER OF POLYCOMB |
Ama15367 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
Ama15368 | SEGMENT POLARITY PROTEIN DISHEVELLED |
Ama15369 | ANGIOTENSIN-CONVERTING ENZYME |
Ama15370 | THIOESTERASE 1/PROTEASE 1/LYSOPHOSPHOLIPASE L1 |
Ama15371 | ANGIOTENSIN-CONVERTING ENZYME |
Ama15380 | CDC42 GTPASE-ACTIVATING PROTEIN |