The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama15168 | |
Ama15170 | RING FINGER PROTEIN 32 |
Ama15171 | |
Ama15173 | THAP DOMAIN PROTEIN |
Ama15174 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama15175 | |
Ama15176 | |
Ama15177 | WHEY ACDIC PROTEIN WAP |
Ama15179 | RING FINGER PROTEIN 32 |
Ama15182 | |
Ama15183 | UNCHARACTERIZED |
Ama15184 | |
Ama15185 | PHOSPHATIDYLGLYCEROPHOSPHATASE AND PROTEIN-TYROSINE PHOSPHATASE 1 |
Ama15186 | TETRASPANIN |
Ama15187 | |
Ama15188 | TETRASPANIN |
Ama15189 | TETRASPANIN |
Ama15192 | |
Ama15196 | ANKYRIN REPEAT FAMILY PROTEIN |
Ama15197 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
Ama15198 | |
Ama151_5db7b01a | PROTEIN CBG23764 |
Ama15204 | |
Ama15205 | THAP DOMAIN PROTEIN |
Ama15206 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7 |
Ama15207 | |
Ama15208 | PERIOSTIN-RELATED |
Ama15209 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama15210 | INHIBITOR OF APOPTOSIS |
Ama15211 | SWI/SNF COMPLEX-RELATED |
Ama15212 | ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE, PEROXISOMAL |
Ama15213 | JUXTAPOSED WITH ANOTHER ZINC FINGER PROTEIN 1 |
Ama15214 | ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL |
Ama15215 | |
Ama15219 | |
Ama15220 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Ama15221 | MITOGEN-ACTIVATED PROTEIN KINASE |
Ama15222 | ANKYRIN REPEAT AND EF-HAND DOMAIN-CONTAINING PROTEIN 1 |
Ama15223 | |
Ama15224 | GLUTATHIONE PEROXIDASE |
Ama15226 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama15227 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama15228 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama15230 | RETINOL DEHYDROGENASE |
Ama15232 | |
Ama15233 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama15234 | NG37 |
Ama15235 | |
Ama15236 | 40S RIBOSOMAL PROTEIN S25 |
Ama15238 | DEOXYRIBONUCLEASE TATDN2-RELATED |