The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama14754 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
Ama14756 | |
Ama14757 | |
Ama14759 | NECTIN-RELATED |
Ama14760 | |
Ama14761 | |
Ama14763 | |
Ama14766 | NUCLEOLAR GTP-BINDING PROTEIN 1 |
Ama14767 | GLUCOSE-6-PHOSPHATASE |
Ama14768 | NF-KAPPA-B INHIBITOR ALPHA |
Ama14769 | |
Ama14770 | |
Ama14771 | PUTATIVE-RELATED |
Ama14772 | |
Ama14773 | ZETA-COAT PROTEIN |
Ama14774 | HOMEOBOX PROTEIN ABDOMINAL-B |
Ama14776 | |
Ama14777 | |
Ama14778 | |
Ama14779 | HOMEOBOX PROTEIN HOX |
Ama14780 | HOMEOBOX PROTEIN HOX |
Ama14783 | HOMEOTIC PROTEIN DEFORMED |
Ama14792 | HOMEOTIC PROTEIN DEFORMED |
Ama14794 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama14795 | PROTEIN ZERKNUELLT 1-RELATED |
Ama14796 | PROTEIN ZERKNUELLT 1-RELATED |
Ama14798 | HOMEOBOX PROTEIN ROUGH-RELATED |
Ama14799 | 39S RIBOSOMAL PROTEIN L32, MITOCHONDRIAL |
Ama147_5db7b01a | KINESIN-LIKE PROTEIN KLP-3 |
Ama14800 | |
Ama14801 | BICD FAMILY-LIKE CARGO ADAPTER |
Ama14802 | UNHEALTHY RIBOSOME BIOGENESIS PROTEIN 2 HOMOLOG |
Ama14803 | HMG-BOX TRANSCRIPTION FACTOR BBX |
Ama14805 | |
Ama14806 | NEPHRIN |
Ama14808 | AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE |
Ama14809 | |
Ama14810 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama14813 | AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE |
Ama14815 | AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE |
Ama14816 | |
Ama14817 | AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE |
Ama14818 | URIDINE PHOSPHORYLASE |
Ama14819 | TRANSPOSABLE ELEMENT-RELATED |
Ama14822 | PROTEIN SIDEKICK |
Ama14826 | |
Ama14827 | |
Ama14828 | TESTICULAR SOLUBLE ADENYLYL CYCLASE |
Ama14831 | NON-SPECIFIC LETHAL 1, ISOFORM M |
Ama14832 |