The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama14423 | UNCHARACTERIZED |
Ama14424 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama14425 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama14426 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama14427 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama14431 | LIPOCALIN-1 INTERACTING MEMBRANE RECEPTOR LIMR |
Ama14433 | |
Ama14434 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama14435 | |
Ama14436 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama14441 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama14443 | PROTEIN CBG10425 |
Ama14444 | |
Ama14446 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama14447 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama14448 | TRANSPOSON |
Ama14449 | |
Ama14451 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama14452 | |
Ama14453 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama14454 | TATA-BOX BINDING PROTEIN |
Ama14455 | |
Ama14456 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama14457 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama14458 | INHIBITOR OF APOPTOSIS |
Ama14461 | |
Ama14462 | ZINC FINGER PROTEIN |
Ama14463 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama14464 | HL01030P-RELATED |
Ama14465 | |
Ama14467 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Ama14468 | ZGC:195170 |
Ama14469 | HL01030P-RELATED |
Ama14471 | POLY A POLYMERASE CID PAP -RELATED |
Ama14472 | |
Ama14473 | |
Ama14475 | |
Ama14476 | |
Ama14478 | TETRASPANIN |
Ama14481 | |
Ama14482 | |
Ama14492 | |
Ama144_5db7b01a | VWFC DOMAIN-CONTAINING PROTEIN |
Ama14506 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama14507 | BTB/POZ DOMAIN-CONTAINING |
Ama14508 | BTB/POZ DOMAIN-CONTAINING |
Ama14509 | PROTEIN CBG18333 |
Ama14510 | HOMEOBOX PROTEIN GBX |
Ama14522 | UNCHARACTERIZED |
Ama14523 | - |