The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama14055 | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER |
Ama14056 | |
Ama14057 | |
Ama14058 | TATA-BOX BINDING PROTEIN |
Ama14059 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama14060 | ZINC FINGER PROTEIN |
Ama14061 | GERANYLGERANYL PYROPHOSPHATE SYNTHASE |
Ama14062 | ZINC FINGER PROTEIN ZPR1 |
Ama14064 | |
Ama14065 | MYOSIN LIGHT CHAIN 1, 3 |
Ama14066 | MYD88 |
Ama14067 | TESTICULAR SOLUBLE ADENYLYL CYCLASE |
Ama14068 | |
Ama14069 | |
Ama14072 | UNCHARACTERIZED |
Ama14073 | REVERSE TRANSCRIPTASES |
Ama14074 | UNCHARACTERIZED |
Ama14075 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama14076 | BAX INHIBITOR-RELATED |
Ama14078 | IP22168P |
Ama14080 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
Ama14081 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM70 |
Ama14082 | CYCLIN |
Ama14083 | UNCHARACTERIZED |
Ama14084 | |
Ama14085 | POLYCOMB GROUP PROTEIN |
Ama14086 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama14087 | ANNEXIN |
Ama14088 | NUCLEAR RECEPTOR COACTIVATOR 6 |
Ama14089 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
Ama14090 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
Ama14091 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
Ama14092 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
Ama14093 | ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED |
Ama14094 | DUF4291 DOMAIN-CONTAINING PROTEIN |
Ama14095 | UNCHARACTERIZED |
Ama14096 | |
Ama14097 | SOLUTE CARRIER FAMILY 25 MEMBER 44 |
Ama14099 | COILED-COIL DOMAIN-CONTAINING PROTEIN 153 |
Ama140_5db7b01a | TETRASPANIN |
Ama14100 | TRIACYLGLYCEROL LIPASE |
Ama14101 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
Ama14105 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama14106 | THAP DOMAIN PROTEIN |
Ama14107 | THAP DOMAIN PROTEIN |
Ama14108 | |
Ama14109 | NEGATIVE ELONGATION FACTOR COMPLEX MEMBER B |
Ama14110 | DEOXYHYPUSINE SYNTHASE |
Ama14113 | |
Ama14115 | MULTI-COPPER OXIDASE |