The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama14116 | SERINE/THREONINE-PROTEIN KINASE FRAY2 |
Ama14118 | FMRFAMIDE RECEPTOR-RELATED |
Ama14119 | |
Ama14120 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama14121 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama14122 | |
Ama14125 | |
Ama14126 | |
Ama14127 | FOS TRANSCRIPTION FACTOR-RELATED |
Ama14129 | TRANSPOSABLE ELEMENT-RELATED |
Ama14131 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama14132 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama14133 | |
Ama14134 | |
Ama14135 | UNCHARACTERIZED |
Ama14136 | |
Ama14137 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama14138 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama14139 | |
Ama14141 | DEOXYRIBONUCLEASE |
Ama14142 | CONDENSIN-2 COMPLEX SUBUNIT G2 |
Ama14144 | EG:80H7.2 PROTEIN |
Ama14145 | SORTING NEXIN-4 |
Ama14146 | NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 |
Ama14147 | SERINE/THREONINE-PROTEIN KINASE |
Ama14148 | |
Ama14149 | |
Ama14150 | NADPH OXIDASE |
Ama14151 | |
Ama14152 | DOUBLECORTIN DOMAIN CONTAINING 2 |
Ama14153 | PEROXISOMAL BIOGENESIS FACTOR 19 |
Ama14154 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama14155 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama14156 | |
Ama14157 | |
Ama14158 | - |
Ama14166 | DIACYLGLYCEROL KINASE |
Ama14167 | |
Ama14168 | |
Ama14169 | |
Ama14175 | UNCHARACTERIZED |
Ama14177 | PLASMINOGEN-RELATED |
Ama14178 | |
Ama14180 | RETROTRANSPOSON GAG-LIKE PROTEIN 9 |
Ama14181 | NEPHRIN |
Ama14182 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
Ama14183 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
Ama14184 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
Ama14185 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama14186 | HISTIDINE-RICH GLYCOPROTEIN |