The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama13795 | |
Ama13797 | |
Ama13798 | |
Ama13799 | |
Ama137_5db7b01a | PHOSPHATE TRANSPORTER |
Ama13800 | |
Ama13801 | |
Ama13802 | CARBOHYDRATE SULFOTRANSFERASE |
Ama13803 | CARBOHYDRATE SULFOTRANSFERASE |
Ama13804 | |
Ama13805 | |
Ama13806 | |
Ama13807 | AGAP000321-PA |
Ama13808 | SI:CH211-171H4.7-RELATED |
Ama13809 | GTP-BINDING PROTEIN-RELATED |
Ama13810 | |
Ama13812 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama13814 | GTP-BINDING PROTEIN-RELATED |
Ama13815 | UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN |
Ama13816 | PROLINE AND SERINE-RICH PROTEIN 3 |
Ama13817 | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8 |
Ama13818 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3 |
Ama13819 | |
Ama13821 | UNCHARACTERIZED |
Ama13822 | HMG-BOX TRANSCRIPTION FACTOR BBX |
Ama13823 | HMG-BOX TRANSCRIPTION FACTOR BBX |
Ama13824 | |
Ama13825 | LITHOSTATHINE |
Ama13826 | STEROL DESATURASE-RELATED PROTEIN |
Ama13827 | |
Ama13828 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama13829 | INHIBITOR OF APOPTOSIS |
Ama13830 | TYROSINASE FAMILY MEMBER |
Ama13831 | TYROSINASE FAMILY MEMBER |
Ama13832 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama13833 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama13834 | INHIBITOR OF APOPTOSIS |
Ama13835 | MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B |
Ama13837 | |
Ama13838 | |
Ama13839 | |
Ama13840 | COATOMER |
Ama13842 | |
Ama13843 | |
Ama13844 | |
Ama13846 | |
Ama13847 | |
Ama13848 | DIAMINE N-ACETYLTRANSFERASE |
Ama13849 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama13850 | SRCR DOMAIN-CONTAINING PROTEIN |