The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama13287 | PROTEIN KIAA0494 |
Ama13288 | PROTEIN CBG22215 |
Ama13289 | GUANINE NUCLEOTIDE EXCHANGE C9ORF72 |
Ama13290 | B-CELL LYMPHOMA/LEUKEMIA 11 |
Ama13291 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
Ama13294 | KREMEN PROTEIN |
Ama13295 | |
Ama13296 | TEKTIN |
Ama13297 | |
Ama13299 | |
Ama132_5db7b01a | PROTEIN CBG07384 |
Ama13301 | NUCLEOPROTEIN TPR-RELATED |
Ama13303 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama13304 | |
Ama13305 | |
Ama13307 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
Ama13309 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama13310 | NUCLEOTIDE KINASE |
Ama13312 | |
Ama13313 | UNCHARACTERIZED |
Ama13314 | NUCLEOTIDE KINASE |
Ama13315 | |
Ama13316 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
Ama13317 | PUTATIVE-RELATED |
Ama13318 | |
Ama13319 | MOLTING PROTEIN MLT-4 |
Ama13320 | |
Ama13321 | BTB/POZ DOMAIN-CONTAINING PROTEIN 19 |
Ama13322 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama13323 | GLUCOSYLCERAMIDASE |
Ama13325 | PUTATIVE-RELATED |
Ama13326 | TRANSMEMBRANE PROTEIN |
Ama13327 | RHO GTPASE-ACTIVATING PROTEIN 100F |
Ama13336 | |
Ama13358 | RHO GTPASE-ACTIVATING PROTEIN 100F |
Ama13360 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama13361 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama13362 | |
Ama13365 | |
Ama13366 | |
Ama13368 | SPOT2-RELATED |
Ama13370 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama13371 | |
Ama13373 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama13376 | |
Ama13377 | |
Ama13378 | |
Ama13380 | - |
Ama13381 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama13382 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |