The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama13072 | NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 |
Ama13073 | WASH COMPLEX SUBUNIT 5 |
Ama13074 | ENOLASE SUPERFAMILY, MANDELATE RACEMASE |
Ama13075 | ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED |
Ama13076 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama13081 | THAP DOMAIN PROTEIN |
Ama13082 | LEUCOKININ RECEPTOR-RELATED |
Ama13083 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama13084 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama13087 | SLL0310 PROTEIN |
Ama13088 | ATP-DEPENDENT DNA HELICASE |
Ama13089 | INHIBITOR OF APOPTOSIS |
Ama13090 | SLL0310 PROTEIN |
Ama13091 | |
Ama13095 | |
Ama13096 | |
Ama13097 | |
Ama13098 | SERINE/THREONINE-PROTEIN KINASE |
Ama130_5db7b01a | ZINC FINGER PROTEIN |
Ama13102 | HISTONE DEACETYLASE HDAC1-RELATED |
Ama13104 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 |
Ama13105 | |
Ama13106 | UNCHARACTERIZED |
Ama13107 | UNCHARACTERIZED |
Ama13108 | |
Ama13108.1.5db7de70 | |
Ama13109 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama13111 | |
Ama13114 | NUCLEAR PORE COMPLEX PROTEIN NUP |
Ama13115 | ATP SYNTHASE DELTA/EPSILON CHAIN |
Ama13116 | |
Ama13117 | LIPOPROTEIN-RELATED |
Ama13118 | CYTOSOLIC REGULATOR PIANISSIMO |
Ama13120 | MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBER |
Ama13121 | NADH-CYTOCHROME B5 REDUCTASE |
Ama13122 | - |
Ama13123 | - |
Ama13124 | HISTONE DEACETYLASE HDAC1-RELATED |
Ama13125 | |
Ama13126 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama13127 | E3 UBIQUITIN-PROTEIN LIGASE HECTD3 |
Ama13128 | E3 UBIQUITIN-PROTEIN LIGASE HECTD3 |
Ama13130 | |
Ama13132 | |
Ama13133 | - |
Ama13134 | LEUCINE-RICH REPEAT-CONTAINING |
Ama13135 | FATTY ACID SYNTHASE |
Ama13136 | FATTY ACID SYNTHASE |
Ama13137 | FATTY ACID SYNTHASE |
Ama13141 |