The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama13209 | INTEGRAL MEMBRANE PROTEIN DGCR2/IDD |
Ama13211 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
Ama13213 | |
Ama13214 | |
Ama13215 | STEROL DESATURASE |
Ama13216 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7 |
Ama13222 | TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 |
Ama13223 | ALPHA-N-ACETYLGLUCOSAMINIDASE |
Ama13225 | G-PROTEIN COUPLED RECEPTOR |
Ama13226 | |
Ama13227 | DIMETHYLADENOSINE TRANSFERASE |
Ama13228 | SMALL INTEGRAL MEMBRANE PROTEIN 7 |
Ama13230 | NUCLEAR PORE COMPLEX PROTEIN NUP155 |
Ama13231 | |
Ama13235 | DNA-BINDING PROTEIN INHIBITOR |
Ama13238 | RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 |
Ama13239 | 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA |
Ama13240 | |
Ama13241 | |
Ama13242 | RNA-BINDING PROTEIN RELATED |
Ama13243 | |
Ama13244 | SH3 DOMAIN-CONTAINING |
Ama13247 | JOUBERIN |
Ama13249 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Ama13252 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
Ama13255 | HEH2P |
Ama13256 | |
Ama13257 | IP13529P |
Ama13258 | OSJNBA0013A04.12 PROTEIN |
Ama13259 | |
Ama13260 | |
Ama13261 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
Ama13264 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Ama13265 | LIPASE |
Ama13266 | |
Ama13268 | PROTEIN G1-LIKE2 |
Ama13269 | |
Ama13270 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama13271 | CYTOCHROME P450 508A4-RELATED |
Ama13272 | |
Ama13273 | CYTOCHROME P450 508A4-RELATED |
Ama13274 | HEME-BINDING MONOOXYGENASE FAMILY |
Ama13275 | CYTOCHROME P450 508A4-RELATED |
Ama13276 | |
Ama13277 | CYTOCHROME P450 508A4-RELATED |
Ama13278 | CYTOCHROME P450 508A4-RELATED |
Ama13279 | GLUCOKINASE REGULATORY PROTEIN |
Ama13281 | UNCHARACTERIZED |
Ama13283 | UNCHARACTERIZED |
Ama13284 |