The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama13454 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama13455 | |
Ama13456 | |
Ama13457 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2D |
Ama13458 | |
Ama13459 | PUTATIVE-RELATED |
Ama13460 | TRANSPOSON |
Ama13461 | PROTEIN PHOSPHATASE |
Ama13462 | |
Ama13463 | |
Ama13464 | THAP DOMAIN PROTEIN |
Ama13465 | ATP-DEPENDENT DNA HELICASE |
Ama13466 | |
Ama13467 | CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2 |
Ama13468 | |
Ama13469 | |
Ama13470 | |
Ama13471 | DNAJ HOMOLOG SUBFAMILY C MEMBER 14 |
Ama13476 | |
Ama13477 | TRANSPOSON |
Ama13478 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama13479 | |
Ama13480 | NETRIN/LAMININ-RELATED |
Ama13481 | NETRIN/LAMININ-RELATED |
Ama13483 | NETRIN/LAMININ-RELATED |
Ama13484 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama13485 | NETRIN/LAMININ-RELATED |
Ama13487 | |
Ama13488 | |
Ama13491 | MYC PROTO-ONCOGENE |
Ama13492 | THAP DOMAIN PROTEIN |
Ama13493 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama13494 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama13495 | |
Ama13496 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama13497 | ATP-DEPENDENT DNA HELICASE |
Ama13498 | THAP DOMAIN PROTEIN |
Ama13499 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama134_5db7b01a | ENDONUCLEASE-RELATED |
Ama13500 | |
Ama13501 | XAA-PRO AMINOPEPTIDASE 3 |
Ama13502 | ATP-DEPENDENT DNA HELICASE |
Ama13503 | |
Ama13504 | |
Ama13505 | INHIBITOR OF APOPTOSIS |
Ama13506 | |
Ama13507 | PROTEIN CBG23764 |
Ama13508 | |
Ama13509 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama13510 |