The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama13724 | TETRASPANIN |
Ama13725 | HCLS1-BINDING PROTEIN 3 |
Ama13726 | CENTROSOMAL PROTEIN OF 70 KDA |
Ama13727 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama13728 | XANTHINE DEHYDROGENASE |
Ama13731 | HOMEOBOX PROTEIN ENGRAILED |
Ama13732 | HOMEOBOX PROTEIN ENGRAILED |
Ama13733 | |
Ama13734 | MYOSIN |
Ama13735 | |
Ama13737 | SOLUTE CARRIER FAMILY 17 |
Ama13738 | |
Ama13741 | HEDGEHOG |
Ama13742 | HEDGEHOG |
Ama13744 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Ama13746 | |
Ama13747 | RUVB-RELATED REPTIN AND PONTIN |
Ama13748 | 4-NITROPHENYLPHOSPHATASE-RELATED |
Ama13749 | |
Ama13750 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D |
Ama13751 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D |
Ama13752 | |
Ama13753 | |
Ama13754 | BETA-GALACTOSIDASE RELATED |
Ama13755 | BETA-GALACTOSIDASE RELATED |
Ama13758 | PROTEIN CBG03580 |
Ama13760 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama13761 | |
Ama13762 | ACYL-COA DEHYDROGENASE |
Ama13763 | |
Ama13764 | PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3 |
Ama13768 | PEPTIDASE |
Ama13769 | |
Ama13771 | PROTEIN CBG26694 |
Ama13774 | |
Ama13776 | |
Ama13777 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama13779 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
Ama13781 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama13782 | |
Ama13783 | PROTEIN FMC1 HOMOLOG |
Ama13784 | AQUAPORIN TRANSPORTER |
Ama13785 | AQUAPORIN TRANSPORTER |
Ama13786 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
Ama13787 | |
Ama13788 | HISTIDINE-RICH GLYCOPROTEIN |
Ama13789 | |
Ama13791 | |
Ama13792 | CLASP |
Ama13794 | MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1 |