The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama13929 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama13930 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama13931 | |
Ama13932 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama13933 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama13934 | |
Ama13935 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama13936 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama13937 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama13938 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama13939 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
Ama13940 | |
Ama13941 | |
Ama13942 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama13943 | PEPTIDASE |
Ama13944 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama13946 | N-ALPHA-ACETYLTRANSFERASE |
Ama13948 | PROTEIN SIDEKICK |
Ama13949 | |
Ama13952 | ARP2/3 COMPLEX 20 KD SUBUNIT |
Ama13953 | EXTRA SPINDLE POLES 1-RELATED |
Ama13955 | EXTRA SPINDLE POLES 1-RELATED |
Ama13956 | EXTRA SPINDLE POLES 1-RELATED |
Ama13957 | ATAXIN-7-LIKE PROTEIN 3 |
Ama13958 | ATAXIN-7-LIKE PROTEIN 3 |
Ama13959 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama13960 | THYROTROPH EMBRYONIC FACTOR RELATED |
Ama13961 | REPETIN |
Ama13962 | |
Ama13963 | SERINE HYDROXYMETHYLTRANSFERASE |
Ama13966 | NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER |
Ama13967 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama13968 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama13969 | |
Ama13970 | SEX PEPTIDE RECEPTOR |
Ama13971 | NF-KAPPA-B INHIBITOR ALPHA |
Ama13972 | |
Ama13973 | |
Ama13974 | METALLOPROTEASE M41 FTSH |
Ama13976 | |
Ama13977 | LD33804P |
Ama13979 | BETA-MANNOSIDASE |
Ama13980 | CCAAT/ENHANCER BINDING PROTEIN |
Ama13981 | |
Ama13982 | MALATE DEHYDROGENASE |
Ama13983 | MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN |
Ama13985 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
Ama13990 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Ama13991 | |
Ama13992 |