The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama13852 | |
Ama13853 | |
Ama13854 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama13855 | PROTEIN BARK BEETLE |
Ama13856 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama13874 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama13876 | FYVE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 |
Ama13877 | IQ CALMODULIN-BINDING MOTIF CONTAINING PROTEIN 1 |
Ama13878 | |
Ama13879 | |
Ama13881 | |
Ama13882 | F-BOX ONLY PROTEIN 33 |
Ama13884 | HL07962P-RELATED |
Ama13885 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
Ama13886 | NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR |
Ama13887 | CELL DIVISION PROTEIN KINASE |
Ama13888 | PUTATIVE-RELATED |
Ama13889 | |
Ama13890 | THIAMIN PYROPHOSPHOKINASE |
Ama13891 | POLYCYSTIN FAMILY MEMBER |
Ama13892 | |
Ama13893 | ZINC FINGER PROTEIN |
Ama13894 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
Ama13895 | |
Ama13896 | |
Ama13897 | |
Ama138_5db7b01a | COILIN P80 |
Ama13901 | ARYLSULFATASE |
Ama13903 | |
Ama13904 | COMPLEMENT FACTOR H-RELATED |
Ama13905 | COMPLEMENT FACTOR H-RELATED |
Ama13906 | |
Ama13909 | TRANSPOSABLE ELEMENT-RELATED |
Ama13910 | UNCHARACTERIZED |
Ama13911 | ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK |
Ama13913 | SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA |
Ama13914 | |
Ama13915 | |
Ama13916 | |
Ama13917 | ZINC FINGER PROTEIN |
Ama13918 | NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1 |
Ama13919 | SUGAR KINASE |
Ama13920 | TESTIS-EXPRESSED PROTEIN 49 |
Ama13922 | CHAPERONIN |
Ama13923 | VACUOLAR PROTON ATPASES |
Ama13924 | VACUOLAR PROTON ATPASES |
Ama13925 | |
Ama13926 | |
Ama13927 | |
Ama13928 | SRCR DOMAIN-CONTAINING PROTEIN |