The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama13383 | VERTNIN |
Ama13386 | |
Ama13387 | GLYCOSYLTRANSFERASE |
Ama13389 | |
Ama13390 | |
Ama13391 | |
Ama13392 | |
Ama13393 | |
Ama13395 | |
Ama13396 | PUTATIVE-RELATED |
Ama13397 | THAP DOMAIN PROTEIN |
Ama13398 | |
Ama13399 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama133_5db7b01a | CONDENSIN COMPLEX SUBUNIT 2 |
Ama13401 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama13402 | THAP DOMAIN PROTEIN |
Ama13403 | OXIDASE/PEROXIDASE |
Ama13404 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama13405 | |
Ama13406 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama13408 | ALKALINE PHOSPHATASE |
Ama13410 | |
Ama13411 | |
Ama13412 | REVERSE TRANSCRIPTASES |
Ama13416 | |
Ama13418 | |
Ama13420 | |
Ama13427 | |
Ama13428 | |
Ama13429 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
Ama13430 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama13431 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama13432 | |
Ama13433 | TUDOR DOMAIN CONTAINING PROTEIN |
Ama13434 | TUDOR DOMAIN CONTAINING PROTEIN |
Ama13435 | |
Ama13436 | THAP DOMAIN-CONTAINING |
Ama13437 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama13438 | PROTEIN CBG22215 |
Ama13439 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama13441 | SI:CH211-266K2.1 |
Ama13442 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama13445 | PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN |
Ama13446 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
Ama13448 | PIKACHURIN-LIKE PROTEIN |
Ama13449 | |
Ama13450 | |
Ama13451 | |
Ama13452 | UNCHARACTERIZED |
Ama13453 | UNCHARACTERIZED |