About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361 Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama12884FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
Ama12885HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Ama12886ZINC FINGER PROTEIN
Ama12888CYSTEINE PROTEASE FAMILY C1-RELATED
Ama12891CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
Ama12893TRANSPOSABLE ELEMENT-RELATED
Ama12894MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER
Ama12895
Ama12896TRANSPOSABLE ELEMENT-RELATED
Ama12898DEDICATOR OF CYTOKINESIS DOCK
Ama12899PHOSPHATASE AND ACTIN REGULATOR PHACTR
Ama12900CYTOCHROME P450 508A4-RELATED
Ama12901
Ama12902DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT
Ama12903
Ama12904PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama12905
Ama12906INTERFERON-INDUCED PROTEIN 44
Ama12907
Ama12908
Ama12909INTERFERON-INDUCED PROTEIN 44
Ama12910CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Ama12911SLEI FAMILY PROTEIN
Ama12912INHIBITOR OF APOPTOSIS
Ama12913
Ama12914
Ama12916
Ama12917
Ama12918L1 TRANSPOSABLE ELEMENT-RELATED
Ama12919
Ama12920
Ama12921NEUROLIGIN
Ama12922BETA-1,4-GALACTOSYLTRANSFERASE
Ama12924UNCHARACTERIZED
Ama12925BETA-1,4-GALACTOSYLTRANSFERASE
Ama12926BETA-1,4-GALACTOSYLTRANSFERASE
Ama12927INHIBITOR OF APOPTOSIS
Ama12928RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama12929BETA-1,4-GALACTOSYLTRANSFERASE
Ama12930BETA-1,4-GALACTOSYLTRANSFERASE
Ama12931
Ama12932UNCHARACTERIZED
Ama12933
Ama12934ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Ama12935
Ama12936
Ama12937BETA-1,4-GALACTOSYLTRANSFERASE
Ama12938ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Ama12939BETA-1,4-GALACTOSYLTRANSFERASE
Ama12940UBIQUITIN-CONJUGATING ENZYME E2
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