The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama12564 | DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT |
Ama12565 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 |
Ama12566 | |
Ama12567 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama12568 | NUCLEAR FACTOR INTERLEUKIN-3-REGULATED PROTEIN |
Ama12569 | NF-KAPPA-B INHIBITOR ALPHA |
Ama12570 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama12571 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama12572 | NARDILYSIN |
Ama12573 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama12574 | NUCLEAR FACTOR I |
Ama12575 | TRANSPORTIN 3 AND IMPORTIN 13 |
Ama12577 | UNCHARACTERIZED |
Ama12578 | PROTEIN C9ORF135 |
Ama12579 | GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER |
Ama12580 | |
Ama12581 | TYROSINE-PROTEIN KINASE |
Ama12582 | RNA POLYMERASE II-ASSOCIATED PROTEIN 1 |
Ama12583 | CYSTEINE-RICH PDZ-BINDING PROTEIN |
Ama12585 | GDAP1, ISOFORM A |
Ama12586 | LD33804P |
Ama12587 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Ama12588 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Ama12590 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
Ama12591 | |
Ama12592 | ENVOPLAKIN |
Ama12598 | ENVOPLAKIN |
Ama12602 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
Ama12605 | |
Ama12606 | SERINE/THREONINE-PROTEIN KINASE |
Ama12608 | SR-RELATED CTD ASSOCIATED FACTOR 6 |
Ama12609 | FIVE-SPAN TRANSMEMBRANE PROTEIN M83 |
Ama12610 | |
Ama12611 | VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT-ASSOCIATED REGULATORY PROTEIN |
Ama12612 | |
Ama12613 | |
Ama12614 | |
Ama12615 | |
Ama12616 | |
Ama12617 | COILED-COIL DOMAIN-CONTAINING PROTEIN 151 |
Ama12618 | COILED-COIL DOMAIN-CONTAINING PROTEIN 151 |
Ama12619 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama12620 | COILED-COIL DOMAIN-CONTAINING PROTEIN 151 |
Ama12621 | |
Ama12622 | |
Ama12623 | METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA TYPE C PROTEIN |
Ama12624 | |
Ama12625 | |
Ama12626 | |
Ama12627 |