The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama12365 | |
Ama12366 | PUTATIVE-RELATED |
Ama12370 | |
Ama12380 | |
Ama12381 | - |
Ama12382 | |
Ama12383 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama12385 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama12386 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama12388 | G-PROTEIN COUPLED RECEPTOR |
Ama12391 | G-PROTEIN COUPLED RECEPTOR |
Ama12394 | THYROTROPIN-RELEASING HORMONE RECEPTOR |
Ama12397 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama12398 | URIDINE KINASE |
Ama12399 | JBTS17 |
Ama12400 | JBTS17 |
Ama12402 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama12403 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama12404 | - |
Ama12405 | JBTS17 |
Ama12406 | PROTEASOME SUBUNIT ALPHA/BETA |
Ama12407 | NON-SMC ELEMENT 1-RELATED |
Ama12408 | |
Ama12409 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
Ama12410 | REPLICATION PROTEIN A-RELATED |
Ama12411 | PNAS-3 RELATED |
Ama12412 | PROTEIN ARGININE N-METHYLTRANSFERASE |
Ama12414 | YTH YT521-B HOMOLOGY DOMAIN-CONTAINING |
Ama12415 | |
Ama12416 | PLACENTAL PROTEIN 11-RELATED |
Ama12417 | |
Ama12418 | RB1-INDUCIBLE COILED-COIL |
Ama12419 | BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE |
Ama12420 | METHYLTRANSFERASE-LIKE PROTEIN 24 |
Ama12422 | |
Ama12423 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama12424 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama12425 | |
Ama12426 | |
Ama12427 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama12428 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
Ama12429 | UNCHARACTERIZED |
Ama12430 | - |
Ama12431 | |
Ama12432 | SPLICING FACTOR YJU2 |
Ama12434 | REVERSE TRANSCRIPTASES |
Ama12435 | |
Ama12437 | COLLAGEN ALPHA |
Ama12438 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED |
Ama12439 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |