The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama120_5db7b01a | GPI-ANCHORED PROTEIN P137 |
Ama12100 | |
Ama12101 | PUTATIVE-RELATED |
Ama12102 | CYTOSOLIC CARBOXYPEPTIDASE |
Ama12103 | RNA BINDING PROTEIN |
Ama12104 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G |
Ama12105 | |
Ama12107 | GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER |
Ama12108 | MICROCEPHALIN |
Ama12109 | MICROCEPHALIN |
Ama12112 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
Ama12113 | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA |
Ama12114 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
Ama12115 | ATP-DEPENDENT RNA AND DNA HELICASE |
Ama12116 | ANTERIOR GRADIENT PROTEIN-RELATED |
Ama12117 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
Ama12118 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
Ama12120 | C5ORF35 |
Ama12121 | ADHESION G-PROTEIN COUPLED RECEPTOR |
Ama12122 | DYNEIN INTERMEDIATE CHAIN |
Ama12123 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
Ama12124 | |
Ama12125 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
Ama12126 | |
Ama12127 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
Ama12128 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
Ama12129 | HILLARIN |
Ama12130 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama12131 | RGS-GAIP INTERACTING PROTEIN GIPC |
Ama12133 | HISTIDINE-RICH GLYCOPROTEIN |
Ama12134 | EG:80H7.2 PROTEIN |
Ama12136 | SOLUTE CARRIER FAMILY 35 |
Ama12137 | FUKUTIN-RELATED |
Ama12138 | BONUS, ISOFORM C-RELATED |
Ama12139 | SOLUTE CARRIER FAMILY 35 |
Ama12141 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama12142 | WD40 REPEAT PROTEIN |
Ama12143 | TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER |
Ama12144 | F-BOX ONLY PROTEIN |
Ama12145 | CALCIUM BINDING PROTEIN |
Ama12146 | |
Ama12147 | |
Ama12148 | |
Ama12149 | |
Ama12151 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Ama12152 | PROTEIN CBG17025 |
Ama12154 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
Ama12155 | ZINC FINGERS AND HOMEOBOXES PROTEIN 1, ISOFORM 2 |
Ama12156 | METHYLTRANSFERASE-LIKE PROTEIN 24 |
Ama12157 | EUKARYOTIC TRANSLATION ELONGATION FACTOR 1 EPSILON-1 |