The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama11899 | |
Ama11900 | HEH2P |
Ama11901 | PEROXISOMAL BIOGENESIS FACTOR 3 |
Ama11903 | WD40 REPEAT PROTEIN |
Ama11904 | PROTEIN MAGO NASHI HOMOLOG |
Ama11905 | GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT |
Ama11906 | G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER |
Ama11907 | TAL1 SCL INTERRUPTING LOCUS |
Ama11908 | CRSP70 |
Ama11909 | LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATED |
Ama11910 | UNCHARACTERIZED |
Ama11911 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
Ama11912 | PLASMINOGEN RECEPTOR (KT) |
Ama11913 | GEO07743P1 |
Ama11916 | |
Ama11917 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama11918 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama11919 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 |
Ama11920 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 |
Ama11921 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 |
Ama11922 | |
Ama11923 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 |
Ama11924 | ZGC:153352 |
Ama11925 | CYTOCHROME P450 508A4-RELATED |
Ama11926 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11929 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama11930 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11931 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 |
Ama11932 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 |
Ama11933 | PUTATIVE-RELATED |
Ama11934 | ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE |
Ama11935 | UV EXCISION REPAIR PROTEIN RAD23 |
Ama11936 | |
Ama11937 | |
Ama11938 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Ama11942 | PROTEIN SERAC1 |
Ama11943 | ALSIN HOMOLOG |
Ama11944 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama11945 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
Ama11947 | STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 |
Ama11948 | |
Ama11949 | |
Ama11950 | SULFOTRANSFERASE SULT |
Ama11951 | COILED-COIL DOMAIN-CONTAINING PROTEIN 78 |
Ama11953 | KN MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING |
Ama11954 | |
Ama11956 | |
Ama11957 | |
Ama11958 | UBIQUITIN-PROTEIN LIGASE E3C |
Ama11959 |