The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama11633 | EPHRIN TYPE-B RECEPTOR |
Ama11634 | PROTEIN CBG22215 |
Ama11635 | EPHRIN TYPE-B RECEPTOR |
Ama11636 | EPHRIN TYPE-B RECEPTOR |
Ama11637 | EPHRIN TYPE-B RECEPTOR |
Ama11638 | MEMBRALIN/KINETOCHORE PROTEIN NUF2 |
Ama11639 | G-PROTEIN COUPLED RECEPTOR |
Ama11641 | ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6 |
Ama11642 | |
Ama11643 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 |
Ama11644 | UNCHARACTERIZED |
Ama11645 | |
Ama11646 | HISTONE ACETYLTRANSFERASE COMPLEX |
Ama11647 | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT |
Ama11648 | SISTER CHROMATID COHESION PROTEIN DCC1-RELATED |
Ama11649 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
Ama11650 | PHOSPHOTRIESTERASE-RELATED |
Ama11651 | UNCHARACTERIZED |
Ama11652 | |
Ama11653 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama11654 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama11655 | |
Ama11656 | |
Ama11657 | 41-2 PROTEIN ANTIGEN-RELATED |
Ama11658 | R3H DOMAIN-CONTAINING PROTEIN 4 |
Ama11659 | |
Ama11660 | FLAVIN MONOAMINE OXIDASE |
Ama11661 | FLAVIN MONOAMINE OXIDASE |
Ama11662 | |
Ama11665 | |
Ama11670 | |
Ama11671 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Ama11672 | |
Ama11673 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Ama11676 | PROTEIN OF UNKNOWN FUNCTION DUF729 |
Ama11677 | ARMADILLO REPEAT-CONTAINING PROTEIN 1 |
Ama11678 | UNCHARACTERIZED |
Ama11679 | DISCS LARGE |
Ama11682 | TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS |
Ama11684 | COBW-RELATED |
Ama11685 | ANKYRIN REPEAT PROTEIN |
Ama11686 | FORKHEAD BOX PROTEIN |
Ama11687 | NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNIT |
Ama11688 | RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED |
Ama11689 | PROTEIN FAM183B |
Ama11690 | CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED |
Ama11691 | |
Ama11692 | POL PROTEIN |
Ama11694 | GASTRULATION DEFECTIVE PROTEIN 1-RELATED |
Ama11695 | ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 |