The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama11417 | INHIBITOR OF APOPTOSIS |
Ama11418 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama11419 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama11420 | INHIBITOR OF APOPTOSIS |
Ama11421 | DNAJ HOMOLOG SUBFAMILY C MEMBER |
Ama11422 | |
Ama11424 | PEPTIDASE |
Ama11425 | CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED |
Ama11426 | GLUTATHIONE PEROXIDASE |
Ama11427 | SYNAPSE-ASSOCIATED PROTEIN |
Ama11428 | UBIQUITIN-PROTEIN LIGASE E3C |
Ama11429 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
Ama11430 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11431 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11432 | |
Ama11435 | PR DOMAIN ZINC FINGER PROTEIN |
Ama11436 | COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN-CONTAINING PROTEIN 7 |
Ama11437 | DIMETHYLADENOSINE TRANSFERASE |
Ama11438 | XK-RELATED PROTEIN |
Ama11439 | LYSOSOMAL COBALAMIN TRANSPORTER-RELATED |
Ama11440 | ATP-DEPENDENT DNA HELICASE |
Ama11441 | |
Ama11442 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 |
Ama11444 | |
Ama11445 | |
Ama11446 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama11447 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama11448 | |
Ama11449 | NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B |
Ama11450 | |
Ama11452 | |
Ama11453 | SERINE/THREONINE-PROTEIN KINASE PLK |
Ama11457 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Ama11459 | NISCHARIN RELATED |
Ama11461 | PERIOSTIN-RELATED |
Ama11463 | |
Ama11464 | |
Ama11466 | |
Ama11467 | |
Ama11468 | GLYCINE DEHYDROGENASE, DECARBOXYLATING |
Ama11469 | PID DOMAIN-CONTAINING PROTEIN |
Ama11471 | CALRETICULIN AND CALNEXIN |
Ama11473 | VITELLOGENIN-RELATED |
Ama11474 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
Ama11476 | INOSITOL POLYPHOSPHATE KINASE |
Ama11478 | |
Ama11479 | |
Ama11480 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama11481 | |
Ama11482 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |