The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama11086 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
Ama11088 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
Ama11089 | |
Ama11090 | |
Ama11091 | HYPOTHETICAL HEAT DOMAIN-CONTAINING |
Ama11093 | PEPTIDYLPROLYL ISOMERASE |
Ama11095 | AN1-TYPE ZINC FINGER PROTEIN |
Ama11097 | MIS18-BINDING PROTEIN 1 |
Ama11098 | PALMITOYLTRANSFERASE ZDHHC16 |
Ama11099 | PALMITOYLTRANSFERASE ZDHHC16 |
Ama110_5db7b01a | ZINC FINGER PROTEIN DZIP1 |
Ama11100 | |
Ama11101 | 30S RIBOSOMAL PROTEIN S1 |
Ama11102 | PALMITOYLTRANSFERASE ZDHHC16 |
Ama11103 | PALMITOYLTRANSFERASE ZDHHC16 |
Ama11104 | 30S RIBOSOMAL PROTEIN S1 |
Ama11106 | |
Ama11107 | |
Ama11108 | |
Ama11109 | UDP/ADP-SUGAR PYROPHOSPHATASE |
Ama11110 | |
Ama11111 | |
Ama11112 | 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL |
Ama11113 | |
Ama11115 | |
Ama11118 | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED |
Ama11122 | FOIE GRAS |
Ama11123 | |
Ama11140 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama11141 | |
Ama11144 | EXS-RELATED PROTEIN |
Ama11147 | |
Ama11155 | |
Ama11156 | |
Ama11167 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama11169 | |
Ama11173 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama11174 | |
Ama11176 | |
Ama11177 | |
Ama11180 | INHIBITOR OF APOPTOSIS |
Ama11182 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Ama11184 | CT120 PROTEIN |
Ama11185 | UNCHARACTERIZED |
Ama11187 | SOLUTE CARRIER FAMILY 17 |
Ama11189 | UPF0573 PROTEIN C2ORF70 |
Ama11190 | RHO FAMILY GTPASE |
Ama11191 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama11192 | INHIBITOR OF APOPTOSIS |
Ama11193 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |