The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama10800 | ADP-RIBOSYLGLYCOHYDROLASE |
Ama10801 | OSJNBA0013A04.12 PROTEIN |
Ama10802 | ADP-RIBOSYLGLYCOHYDROLASE |
Ama10803 | ADP-RIBOSYLGLYCOHYDROLASE |
Ama10804 | |
Ama10806 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
Ama10807 | COILED-COIL DOMAIN-CONTAINING PROTEIN 97 |
Ama10808 | MRNA EXPORT FACTOR AND BUB3 |
Ama10809 | NUCLEOTIDE KINASE |
Ama10811 | LEUCINE REPEAT ADAPTER PROTEIN 25 |
Ama10812 | RIBONUCLEASE H2 SUBUNIT C |
Ama10814 | LACTOYLGLUTATHIONE LYASE GLYOXALASE I |
Ama10815 | KINETOCHORE-ASSOCIATED PROTEIN 1 |
Ama10816 | KINETOCHORE-ASSOCIATED PROTEIN 1 |
Ama10817 | POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE |
Ama10819 | WD-40 REPEAT PROTEIN |
Ama10822 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Ama10823 | |
Ama10825 | UNCHARACTERIZED |
Ama10826 | MITOCHONDRIAL GENOME MAINTENANCE EXONUCLEASE 1 |
Ama10827 | |
Ama10828 | |
Ama10829 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama10830 | |
Ama10831 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama10832 | PUTATIVE-RELATED |
Ama10833 | TRANSPOSON |
Ama10834 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama10835 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama10836 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama10837 | |
Ama10838 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama10839 | |
Ama10842 | REVERSE TRANSCRIPTASES |
Ama10843 | |
Ama10844 | XANTHINE DEHYDROGENASE |
Ama10845 | |
Ama10846 | MALONATE-SEMIALDEHYDE DEHYDROGENASE |
Ama10847 | |
Ama10848 | ALDOSE-1-EPIMERASE |
Ama10849 | |
Ama10850 | |
Ama10851 | ALDOSE-1-EPIMERASE |
Ama10852 | UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10 |
Ama10853 | ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY |
Ama10854 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama10855 | PROTEIN CBG20215-RELATED |
Ama10858 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Ama10859 | |
Ama10860 | DNA POLYMERASE ETA |