The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama10523 | |
Ama10525 | UNCHARACTERIZED |
Ama10526 | |
Ama10527 | - |
Ama10528 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
Ama10529 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
Ama10530 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
Ama10532 | |
Ama10533 | UNCHARACTERIZED |
Ama10534 | RPA-RELATED PROTEIN RADX |
Ama10535 | MELANOMA INHIBITORY ACTIVITY-RELATED |
Ama10537 | 3-HYDROXYANTHRANILATE 3,4-DIOXYGENASE |
Ama10538 | TRANSMEMBRANE PROTEIN 234 |
Ama10539 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
Ama10544 | |
Ama10545 | |
Ama10546 | |
Ama10547 | |
Ama10548 | UNCHARACTERIZED |
Ama10550 | G-PROTEIN COUPLED RECEPTOR |
Ama10552 | DYNEIN HEAVY CHAIN |
Ama10554 | TRANS-3-HYDROXY-L-PROLINE DEHYDRATASE |
Ama10555 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
Ama10556 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
Ama10557 | |
Ama10559 | HELICASE SRCAP-RELATED |
Ama10560 | PROTEIN CBG17025 |
Ama10562 | CATION TRANSPORT PROTEIN CHAC-RELATED |
Ama10564 | |
Ama10568 | NOTCH LIGAND FAMILY MEMBER |
Ama10570 | UNNAMED PRODUCT |
Ama10574 | DULLARD PROTEIN PHOSPHATASE |
Ama10575 | NISCHARIN RELATED |
Ama10576 | |
Ama10577 | - |
Ama10581 | SERUM RESPONSE FACTOR HOMOLOG |
Ama10582 | PUTATIVE-RELATED |
Ama10585 | |
Ama10586 | |
Ama10587 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
Ama10589 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama10590 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama10591 | SUPEROXIDE DISMUTASE CU-ZN -RELATED |
Ama10592 | PHD FINGER PROTEIN |
Ama10594 | GLYCOSYLTRANSFERASE |
Ama10595 | |
Ama10596 | CONTACTIN 5 |
Ama10597 | |
Ama10598 | |
Ama10599 | DIPEPTIDYL PEPTIDASE III-RELATED |