The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama10663 | HOMOLOC-13 |
Ama10664 | LIN52 FAMILY MEMBER |
Ama10665 | DUAL SPECIFICITY PROTEIN KINASE |
Ama10667 | |
Ama10668 | |
Ama10669 | MINA53 MYC INDUCED NUCLEAR ANTIGEN |
Ama10671 | KICSTOR COMPLEX PROTEIN KAPTIN |
Ama10672 | RBP-RELATED |
Ama10673 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
Ama10674 | RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED |
Ama10675 | HISTONE ACETYLTRANSFERASE |
Ama10676 | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED |
Ama10678 | |
Ama10679 | |
Ama10683 | PROTEIN CBG16200 |
Ama10689 | LIN-24 (TWENTY-FOUR) LIKE |
Ama10690 | |
Ama10691 | SI:DKEY-16J16.4 |
Ama10693 | FOS TRANSCRIPTION FACTOR-RELATED |
Ama10694 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
Ama10695 | |
Ama10696 | PROTEIN CBG16200 |
Ama10697 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama10698 | |
Ama10699 | CALCIUM-BINDING PROTEIN 8-RELATED |
Ama106_5db7b01a | MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L49 |
Ama10700 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama10701 | THAP DOMAIN PROTEIN |
Ama10702 | |
Ama10703 | |
Ama10704 | |
Ama10705 | UNCHARACTERIZED |
Ama10706 | G-PROTEIN COUPLED RECEPTOR |
Ama10708 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama10709 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama10710 | FATTY ACID ACYL TRANSFERASE-RELATED |
Ama10711 | UNCHARACTERIZED |
Ama10713 | PUTATIVE-RELATED |
Ama10717 | HELICASE |
Ama10718 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
Ama10719 | N-LYSINE METHYLTRANSFERASE KMT5A |
Ama10720 | ATP-DEPENDENT RNA HELICASE |
Ama10722 | CARNITINE O-ACYLTRANSFERASE |
Ama10724 | |
Ama10726 | THIOSULFATE SULFERTANSFERASE |
Ama10727 | THIOSULFATE SULFERTANSFERASE |
Ama10728 | RETICULON-LIKE PROTEIN |
Ama10729 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
Ama10730 | AP ENDONUCLEASE |
Ama10731 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |