About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama10460PECANEX
Ama10461MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 17
Ama10462
Ama10463
Ama10464HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
Ama10465SALVADOR FAMILY WW DOMAIN-CONTAINING PROTEIN 1
Ama10466RADIAL SPOKEHEAD-RELATED
Ama10467
Ama10469E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED
Ama10471L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
Ama10473GLUTAMATE DECARBOXYLASE-RELATED
Ama10474PECANEX
Ama10475PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
Ama10476RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama10477RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama10478STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATED
Ama1048030S RIBOSOMAL PROTEIN S12 FAMILY MEMBER
Ama10481MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER
Ama10482BEIGE/BEACH-RELATED
Ama10483
Ama10485
Ama10486RIBONUCLEASE KAPPA
Ama10487PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY F MEMBER 2-RELATED
Ama10488AGAP005574-PA
Ama10489ATP-DEPENDENT DNA HELICASE
Ama10490
Ama10491RHO FAMILY GTPASE
Ama104923-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE
Ama10493UBIQUITIN-ACTIVATING ENZYME E1
Ama10495VISUAL SYSTEM HOMEOBOX 2
Ama10496DEOXYRIBONUCLEASE TATDN2-RELATED
Ama10498INOSITOL POLYPHOSPHATE KINASE
Ama10499REVERSE TRANSCRIPTASES
Ama104_5db7b01aCD59 GLYCOPROTEIN
Ama10500EXPORTIN 1/5
Ama10501TETRATRICOPEPTIDE REPEAT PROTEIN 13
Ama10502-
Ama10504RHO FAMILY GTPASE
Ama10505GREMLIN 1
Ama10507
Ama10508FI17866P1
Ama10509
Ama10513MYOSIN LIGHT CHAIN 1, 3
Ama10515PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE
Ama10516LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11
Ama10517PROTEIN PHOSPHATASE 1 INHIBITOR POTENTIATED BY PROTEIN KINASE C
Ama10519ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Ama10520PUTATIVE-RELATED
Ama10521INHIBITOR OF APOPTOSIS
Ama10522PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12
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