The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama10337 | HEDGEHOG-INTERACTING PROTEIN |
Ama10338 | HEDGEHOG-INTERACTING PROTEIN |
Ama10339 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
Ama10340 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
Ama10341 | ADP-DEPENDENT GLUCOKINASE |
Ama10342 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama10343 | PROTEIN PHOSPATASE 3 REGULATORY SUBUNIT B ALPHA ISOFORM TYPE 1 |
Ama10346 | ELONGATION FACTOR 1-GAMMA |
Ama10347 | COILED-COIL DOMAIN-CONTAINING PROTEIN 151 |
Ama10348 | - |
Ama10349 | - |
Ama10350 | AGAP002036-PA |
Ama10351 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
Ama10352 | VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED |
Ama10353 | AGAP002036-PA |
Ama10355 | UNCHARACTERIZED |
Ama10356 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama10357 | BARRIER TO AUTOINTEGRATION FACTOR 2 |
Ama10358 | MONOCARBOXYLATE TRANSPORTER |
Ama10359 | HYDROLASE OF PHP SUPERFAMILY-RELATED PROTEIN |
Ama10360 | PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 |
Ama10365 | |
Ama10366 | RBM25 PROTEIN |
Ama10367 | HL07962P-RELATED |
Ama10369 | UNCHARACTERIZED |
Ama10371 | UNCHARACTERIZED |
Ama10372 | UNCHARACTERIZED |
Ama10373 | |
Ama10374 | UNCHARACTERIZED |
Ama10375 | UNCHARACTERIZED |
Ama10376 | COILED-COIL DOMAIN-CONTAINING PROTEIN 32 |
Ama10377 | 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED |
Ama10379 | PHOSPHORYN, PUTATIVE-RELATED-RELATED |
Ama10380 | PHOSPHORYN, PUTATIVE-RELATED-RELATED |
Ama10381 | FORKHEAD BOX PROTEIN G1 |
Ama10382 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
Ama10384 | |
Ama10385 | BRISC AND BRCA1-A COMPLEX MEMBER 2 |
Ama10386 | GDP-D-GLUCOSE PHOSPHORYLASE 1 |
Ama10387 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Ama10388 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Ama10389 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Ama10390 | YBAK DOMAIN-CONTAINING PROTEIN |
Ama10391 | |
Ama10392 | MYOSIN LIGHT CHAIN 1, 3 |
Ama10393 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama10394 | |
Ama10395 | RING ZINC FINGER PROTEIN |
Ama10396 | SEEDY PROTEIN A/C FAMILY MEMBER |
Ama10397 |