The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama09956 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama09957 | UNCHARACTERIZED |
Ama09958 | |
Ama09959 | |
Ama09960 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama09961 | |
Ama09962 | GLYCOSYLTRANSFERASE |
Ama09963 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7-RELATED |
Ama09964 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7-RELATED |
Ama09965 | SI:CH211-183D21.1 |
Ama09966 | |
Ama09967 | |
Ama09970 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama09971 | |
Ama09972 | UNCHARACTERIZED |
Ama09973 | |
Ama09974 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama09975 | |
Ama09976 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama09977 | DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN |
Ama09978 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama09979 | FORKHEAD BOX PROTEIN N3-LIKE PROTEIN-RELATED |
Ama09980 | SOLUBLE NSF ATTACHMENT PROTEIN SNAP |
Ama09981 | |
Ama09982 | RRP15-LIKE PROTEIN |
Ama09983 | DDB1- AND CUL4-ASSOCIATED FACTOR 4-RELATED |
Ama09984 | |
Ama09985 | |
Ama09986 | |
Ama09987 | |
Ama09988 | |
Ama09989 | PROPERDIN |
Ama09991 | PROPERDIN |
Ama09992 | ABC TRANSPORTER G FAMILY MEMBER 28 |
Ama09998 | ABC TRANSPORTER G FAMILY MEMBER 28 |
Ama09999 | ABC TRANSPORTER G FAMILY MEMBER 28 |
Ama10000 | |
Ama10001 | ABC TRANSPORTER G FAMILY MEMBER 28 |
Ama10003 | TIGHT JUNCTION-ASSOCIATED PROTEIN 1 |
Ama10004 | UPF0764 PROTEIN C16ORF89 |
Ama10005 | UPF0764 PROTEIN C16ORF89 |
Ama10017 | SYNAPTOTAGMIN 14, ISOFORM D |
Ama10018 | COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN |
Ama10019 | SERINE/THREONINE PROTEIN PHOSPHATASE |
Ama10020 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
Ama10021 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama10022 | |
Ama10023 | MAD2L1-BINDING PROTEIN |
Ama10025 | NUCLEOSIDE DIPHOSPHATE KINASE 6 |
Ama10028 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |