The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama09837 | |
Ama09840 | |
Ama09841 | HOMEOBOX PROTEIN NKX |
Ama09842 | IMPORTIN BETA |
Ama09844 | HOMEOBOX PROTEIN NKX |
Ama09845 | PEPTIDASE |
Ama09846 | COILED-COIL DOMAIN-CONTAINING PROTEIN 43 |
Ama09847 | |
Ama09850 | PEROXIREDOXIN |
Ama09851 | UNCHARACTERIZED |
Ama09852 | N-ACETYLTRANSFERASE 6 |
Ama09853 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama09854 | |
Ama09855 | CATION TRANSPORT PROTEIN CHAC-RELATED |
Ama09856 | TUBULIN FOLDING COFACTOR C |
Ama09857 | |
Ama09858 | |
Ama09861 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama09862 | |
Ama09863 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama09865 | DNAJ HOMOLOG SUBFAMILY C MEMBER 17 |
Ama09866 | TUBULIN--TYROSINE LIGASE |
Ama09867 | |
Ama09868 | INSULINOMA-ASSOCIATED 1 |
Ama09869 | PROTEIN DISPATCHED-RELATED |
Ama09870 | PROTEIN DISPATCHED-RELATED |
Ama09871 | TETRASPANIN |
Ama09872 | PEPTIDASE |
Ama09873 | |
Ama09874 | CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED |
Ama09875 | |
Ama09876 | RIBOSOMAL PROTEIN S6 KINASE |
Ama09877 | |
Ama09878 | |
Ama09879 | |
Ama09880 | PROTEIN BARK BEETLE |
Ama09881 | PROTEIN BARK BEETLE |
Ama09882 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama09883 | CARRIER DOMAIN-CONTAINING PROTEIN |
Ama09884 | SJOEGREN SYNDROME/SCLERODERMA AUTOANTIGEN 1 |
Ama09885 | |
Ama09886 | AUGMIN FAMILY MEMBER |
Ama09887 | SH2 DOMAIN CONTAINING PROTEIN |
Ama09889 | HISTIDINE-RICH GLYCOPROTEIN |
Ama09890 | THISBE |
Ama09891 | MOLTING PROTEIN MLT-4 |
Ama09892 | FOS TRANSCRIPTION FACTOR-RELATED |
Ama09893 | |
Ama09895 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama09897 | KINESIN-RELATED |