The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama09388 | |
Ama09389 | OS10G0105400 PROTEIN |
Ama09390 | |
Ama09391 | |
Ama09392 | OS10G0105400 PROTEIN |
Ama09393 | OS10G0105400 PROTEIN |
Ama09394 | |
Ama09395 | |
Ama09396 | |
Ama09397 | |
Ama09398 | |
Ama09399 | |
Ama09400 | INHIBITOR OF APOPTOSIS |
Ama09401 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama09402 | |
Ama09403 | |
Ama09406 | NUCLEAR PROTEIN SKIP-RELATED |
Ama09407 | ABC1 FAMILY PROTEIN |
Ama09408 | |
Ama09410 | |
Ama09411 | |
Ama09412 | |
Ama09413 | TRANSPOSON |
Ama09416 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama09417 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama09418 | INHIBITOR OF APOPTOSIS |
Ama09419 | |
Ama09420 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama09421 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama09422 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama09423 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama09424 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
Ama09433 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama09434 | |
Ama09435 | |
Ama09436 | |
Ama09437 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama09438 | |
Ama09439 | TRANSPOSON |
Ama09446 | OS10G0105400 PROTEIN |
Ama09447 | |
Ama09448 | |
Ama09451 | |
Ama09453 | |
Ama09454 | OS10G0105400 PROTEIN |
Ama09455 | |
Ama09460 | SODIUM/NUCLEOSIDE COTRANSPORTER |
Ama09470 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
Ama09471 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
Ama09472 | - |