The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama09198 | INTERFERON-INDUCED PROTEIN 44 |
Ama09201 | CYTOCHROME P450 508A4-RELATED |
Ama09202 | KUNITZ-TYPE PROTEASE INHIBITOR-RELATED |
Ama09203 | |
Ama09204 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
Ama09205 | SERINE/THREONINE-PROTEIN KINASE PIM |
Ama09206 | ZGC:174356 |
Ama09207 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama09208 | SERINE/THREONINE-PROTEIN KINASE PLK |
Ama09209 | TUBULIN-SPECIFIC CHAPERONE E |
Ama09210 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
Ama09212 | |
Ama09213 | |
Ama09215 | CALCIUM BINDING PROTEIN |
Ama09216 | SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2 |
Ama09217 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
Ama09218 | |
Ama09219 | SERINE-THREONINE PROTEIN KINASE |
Ama09222 | THAP DOMAIN PROTEIN |
Ama09223 | SERINE-THREONINE PROTEIN KINASE |
Ama09224 | |
Ama09225 | |
Ama09226 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama09228 | SERINE-THREONINE PROTEIN KINASE |
Ama09230 | SERINE-THREONINE PROTEIN KINASE |
Ama09231 | |
Ama09232 | SERINE-THREONINE PROTEIN KINASE |
Ama09234 | |
Ama09235 | |
Ama09236 | |
Ama09242 | |
Ama09243 | |
Ama09244 | |
Ama09245 | DYNEIN REGULATORY COMPLEX PROTEIN 8 |
Ama09246 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED |
Ama09247 | |
Ama09248 | SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54 |
Ama09249 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama09250 | SETA BINDING PROTEIN 1 |
Ama09252 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
Ama09253 | FOS TRANSCRIPTION FACTOR-RELATED |
Ama09254 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Ama09255 | |
Ama09256 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Ama09257 | PUTATIVE-RELATED |
Ama09258 | |
Ama09259 | REGULATOR OF CHROMOSOME CONDENSATION |
Ama09260 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
Ama09261 | |
Ama09262 | CENTROSOMAL PROTEIN OF 128 KDA |