About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama09198INTERFERON-INDUCED PROTEIN 44
Ama09201CYTOCHROME P450 508A4-RELATED
Ama09202KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
Ama09203
Ama09204PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12
Ama09205SERINE/THREONINE-PROTEIN KINASE PIM
Ama09206ZGC:174356
Ama09207MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Ama09208SERINE/THREONINE-PROTEIN KINASE PLK
Ama09209TUBULIN-SPECIFIC CHAPERONE E
Ama09210HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Ama09212
Ama09213
Ama09215CALCIUM BINDING PROTEIN
Ama09216SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2
Ama09217TRANSCRIPTIONAL REPRESSOR PROTEIN YY
Ama09218
Ama09219SERINE-THREONINE PROTEIN KINASE
Ama09222THAP DOMAIN PROTEIN
Ama09223SERINE-THREONINE PROTEIN KINASE
Ama09224
Ama09225
Ama09226REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama09228SERINE-THREONINE PROTEIN KINASE
Ama09230SERINE-THREONINE PROTEIN KINASE
Ama09231
Ama09232SERINE-THREONINE PROTEIN KINASE
Ama09234
Ama09235
Ama09236
Ama09242
Ama09243
Ama09244
Ama09245DYNEIN REGULATORY COMPLEX PROTEIN 8
Ama09246MATRIN 3/NUCLEAR PROTEIN 220-RELATED
Ama09247
Ama09248SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54
Ama09249HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Ama09250SETA BINDING PROTEIN 1
Ama09252HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER
Ama09253FOS TRANSCRIPTION FACTOR-RELATED
Ama09254CELL FATE DETERMINING PROTEIN MAB21-RELATED
Ama09255
Ama09256CELL FATE DETERMINING PROTEIN MAB21-RELATED
Ama09257PUTATIVE-RELATED
Ama09258
Ama09259REGULATOR OF CHROMOSOME CONDENSATION
Ama09260PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1
Ama09261
Ama09262CENTROSOMAL PROTEIN OF 128 KDA
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