About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama08946
Ama08947
Ama08949XAP-5 PROTEIN-RELATED
Ama08950XAP-5 PROTEIN-RELATED
Ama08951PYRROLINE-5-CARBOXYLATE REDUCTASE
Ama08952DELTA(14)-STEROL REDUCTASE
Ama08953COFILIN-RELATED
Ama08958PURPLE ACID PHOSPHATASE
Ama08959SMALL INTEGRAL MEMBRANE PROTEIN 12
Ama08960PA-PL1 PHOSPHOLIPASE FAMILY
Ama08963
Ama08964SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED
Ama089652-AMINOETHYLPHOSPHONATE--PYRUVATE TRANSAMINASE
Ama08967
Ama08968TRICALBIN-1-RELATED
Ama08969NUCLEOLAR AND SPINDLE-ASSOCIATED PROTEIN 1
Ama08970GEO11419P1
Ama08971TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
Ama08972DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7-RELATED
Ama08973TYROSINE-PROTEIN KINASE RECEPTOR
Ama08974
Ama08977DNA-DIRECTED RNA POLYMERASE
Ama08978NEPHROCYSTIN
Ama08979
Ama08980UNCHARACTERIZED
Ama08981UNCHARACTERIZED
Ama08982HEAT SHOCK 70 KDA PROTEIN 14
Ama08983KELCH REPEAT DOMAIN
Ama08984TYROSINE-PROTEIN KINASE RECEPTOR
Ama08985SUSHI DOMAIN-CONTAINING PROTEIN 6
Ama08986REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama08987TRNA METHYLTRANSFERASE
Ama08989SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
Ama08993SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES
Ama08994MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
Ama08995
Ama08996MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
Ama08997PROTEIN STPG4
Ama08999EGL NINE HOMOLOG-RELATED
Ama09001SIGNAL PEPTIDE PEPTIDASE
Ama09002GLE-1-RELATED
Ama09004YDJC DEACETYLASE FAMILY MEMBER
Ama09005ENOYL-COA HYDRATASE
Ama09006
Ama09007PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
Ama09008CORNICHON-RELATED
Ama09009
Ama09010CYTOKINE RECEPTOR
Ama09011CYTOKINE RECEPTOR
Ama09012CYTOKINE RECEPTOR
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