About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama0914252 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama0914352 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama09144HL01030P-RELATED
Ama09145EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED
Ama09148
Ama09149
Ama09150YIPPEE DOMAIN-CONTAINING PROTEIN
Ama09151YIPPEE DOMAIN-CONTAINING PROTEIN
Ama09152
Ama09153GUANINE NUCLEOTIDE EXCHANGE FACTOR
Ama09154
Ama09155GUANINE NUCLEOTIDE EXCHANGE FACTOR
Ama09156CLASPIN
Ama09157
Ama09158CLASPIN
Ama09159
Ama09160CARBOXYLESTERASE
Ama09161ADP RIBOSYLATION FACTOR-RELATED
Ama09162TRANSPOSABLE ELEMENT-RELATED
Ama09163ADP RIBOSYLATION FACTOR-RELATED
Ama09164CARBOXYLESTERASE
Ama09165ADP RIBOSYLATION FACTOR-RELATED
Ama09166TRANSPOSABLE ELEMENT-RELATED
Ama09167CODANIN-1
Ama09168RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Ama09169ALPHA-PROTEIN KINASE VWKA
Ama09171
Ama09172
Ama09173NUCLEAR PORE COMPLEX PROTEIN NUP133
Ama09175NUCLEAR PORE COMPLEX PROTEIN NUP133
Ama09176TRANSLATION ELONGATION FACTOR G-RELATED
Ama09178ALPHA-PROTEIN KINASE VWKA
Ama09179
Ama09180
Ama09181PARANEOPLASTIC ANTIGEN
Ama09182
Ama09184ARGINASE
Ama09185
Ama09186PARANEOPLASTIC ANTIGEN
Ama09187WD REPEAT DOMAIN-CONTAINING FAMILY
Ama09188SYNAPTOTAGMIN
Ama09189DDB1- AND CUL4-ASSOCIATED FACTOR 15
Ama09190SYNTAXIN
Ama09191METHIONINE SYNTHASE
Ama09192EPITHELIAL MEMBRANE PROTEIN-RELATED
Ama09193-
Ama09194
Ama09195
Ama09196ENDONUCLEASE-RELATED
Ama09197INTERFERON-INDUCED PROTEIN 44
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