The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama09142 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama09143 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama09144 | HL01030P-RELATED |
Ama09145 | EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED |
Ama09148 | |
Ama09149 | |
Ama09150 | YIPPEE DOMAIN-CONTAINING PROTEIN |
Ama09151 | YIPPEE DOMAIN-CONTAINING PROTEIN |
Ama09152 | |
Ama09153 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Ama09154 | |
Ama09155 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Ama09156 | CLASPIN |
Ama09157 | |
Ama09158 | CLASPIN |
Ama09159 | |
Ama09160 | CARBOXYLESTERASE |
Ama09161 | ADP RIBOSYLATION FACTOR-RELATED |
Ama09162 | TRANSPOSABLE ELEMENT-RELATED |
Ama09163 | ADP RIBOSYLATION FACTOR-RELATED |
Ama09164 | CARBOXYLESTERASE |
Ama09165 | ADP RIBOSYLATION FACTOR-RELATED |
Ama09166 | TRANSPOSABLE ELEMENT-RELATED |
Ama09167 | CODANIN-1 |
Ama09168 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
Ama09169 | ALPHA-PROTEIN KINASE VWKA |
Ama09171 | |
Ama09172 | |
Ama09173 | NUCLEAR PORE COMPLEX PROTEIN NUP133 |
Ama09175 | NUCLEAR PORE COMPLEX PROTEIN NUP133 |
Ama09176 | TRANSLATION ELONGATION FACTOR G-RELATED |
Ama09178 | ALPHA-PROTEIN KINASE VWKA |
Ama09179 | |
Ama09180 | |
Ama09181 | PARANEOPLASTIC ANTIGEN |
Ama09182 | |
Ama09184 | ARGINASE |
Ama09185 | |
Ama09186 | PARANEOPLASTIC ANTIGEN |
Ama09187 | WD REPEAT DOMAIN-CONTAINING FAMILY |
Ama09188 | SYNAPTOTAGMIN |
Ama09189 | DDB1- AND CUL4-ASSOCIATED FACTOR 15 |
Ama09190 | SYNTAXIN |
Ama09191 | METHIONINE SYNTHASE |
Ama09192 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
Ama09193 | - |
Ama09194 | |
Ama09195 | |
Ama09196 | ENDONUCLEASE-RELATED |
Ama09197 | INTERFERON-INDUCED PROTEIN 44 |